Graduate School of Biological Sciences

Course Catalog Core Requirement Fall Offerings Spring Offerings Program Schedules

Course Catalog

Back to Course Catalog

PSB CMC: Computer Programming in Systems Biology & Bioinformatics
Credits: 1    Course Number: BSR6803.05


Course Director: Avi Ma'ayan    
E-Mail: avi.maayan@mssm.edu

Course Description:

Time: By Arrangement
Room: By Arrangement
Start Date: By Arrangement

This mini course covers computer programming methodologies applied to processing data and analysis of data in the broad fields of Bioinformatics and Systems Biology. Topics covered would include an overview of data structures and algorithms, Perl scripting for processing text files, c programming and MPI (programming for cluster computers), as well as web technologies using Java, JavaScript, HTML, XML, SQL, MySql, and CGI. Students will be required to complete small programming assignments throughout the course.